STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL59963.1Dihydrolipoamide dehydrogenase. (476 aa)    
Predicted Functional Partners:
SCL59966.1
2-oxoglutarate dehydrogenase E2 component.
 0.999
SCL62402.1
2-oxoglutarate dehydrogenase E1 component.
 
 0.999
SCL54895.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.993
SCL46447.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.992
SCL54899.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 0.992
SCL56526.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.992
SCL60327.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.987
SCL60808.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.987
SCL56528.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.982
SCL46449.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.981
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.