STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL60206.1Septum formation. (296 aa)    
Predicted Functional Partners:
SCL53261.1
Hypothetical protein.
  
     0.686
SCL60211.1
Hypothetical protein.
       0.675
SCL49385.1
Hypothetical protein.
  
     0.672
SCL65222.1
Hypothetical protein.
  
     0.660
SCL45362.1
Hypothetical protein.
  
     0.651
SCL45824.1
Hypothetical protein.
  
     0.651
SCL63283.1
Hypothetical protein.
  
     0.646
SCL60204.1
Transcriptional regulator, TetR family.
       0.598
SCL48996.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.596
SCL58577.1
Fibronectin type III domain-containing protein.
  
    0.596
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.