STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL60324.1Protein of unknown function. (145 aa)    
Predicted Functional Partners:
SCL60321.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.860
SCL51586.1
Hypothetical protein.
  
     0.759
SCL52055.1
Protein of unknown function.
  
     0.743
SCL46091.1
Transmembrane protein of unknown function.
  
     0.715
SCL51015.1
Cobalamin-independent synthase, Catalytic domain.
  
     0.710
SCL47610.1
Protein of unknown function.
  
     0.700
rbpA
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.694
SCL49960.1
Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain; Manually curated.
  
     0.674
SCL51243.1
Transcriptional regulator, IclR family.
  
     0.655
SCL65027.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.655
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.