STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL60594.1RloB-like protein. (204 aa)    
Predicted Functional Partners:
SCL60590.1
Hypothetical protein.
 
     0.956
SCL60586.1
Hypothetical protein.
       0.568
SCL52551.1
CYTH domain-containing protein.
  
     0.546
SCL56366.1
Hypothetical protein.
  
     0.523
SCL49522.1
Hypothetical protein.
  
     0.517
SCL63597.1
Hypothetical protein; Manually curated.
  
     0.495
SCL57501.1
Sporadically distributed protein, TIGR04141 family.
  
     0.491
SCL65959.1
PH domain-containing protein.
  
     0.485
SCL49966.1
Acetyltransferase (GNAT) domain-containing protein.
   
    0.476
SCL60596.1
Hypothetical protein.
       0.453
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.