STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL60940.1Iron complex transport system substrate-binding protein. (349 aa)    
Predicted Functional Partners:
SCL60945.1
Iron complex transport system ATP-binding protein.
 
 0.959
SCL58169.1
Iron complex transport system ATP-binding protein.
 
 0.935
SCL58065.1
Iron complex transport system ATP-binding protein.
 
 0.928
SCL60941.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  0.920
SCL58175.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  0.851
SCL60933.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
  
 0.842
SCL57848.1
Iron complex transport system ATP-binding protein.
 
 0.840
SCL58058.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  0.826
SCL58433.1
Iron complex transport system ATP-binding protein; Manually curated.
 
 0.808
SCL48064.1
Iron complex transport system ATP-binding protein.
 
 0.797
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.