STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL61178.1Transcriptional regulator, ArsR family. (99 aa)    
Predicted Functional Partners:
SCL61180.1
Zinc uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.884
SCL61162.1
Zinc transport system substrate-binding protein.
     
 0.748
SCL61172.1
Zinc transport system permease protein.
     
 0.745
SCL61168.1
Zinc transport system ATP-binding protein.
  
  
 0.686
SCL65640.1
ArsR family transcriptional regulator.
  
     0.589
SCL48599.1
Transcriptional regulator, ArsR family.
  
     0.577
SCL48625.1
ArsR family transcriptional regulator.
  
     0.570
SCL61184.1
Hypothetical protein.
       0.565
SCL61160.1
Hypothetical protein.
       0.443
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.