STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL61604.1Membrane carboxypeptidase (penicillin-binding protein). (686 aa)    
Predicted Functional Partners:
SCL46343.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
 
 
 0.885
SCL53628.1
Hypothetical protein.
   
 
 0.845
SCL59572.1
Peptidoglycan synthetase FtsI.
 
 
 0.845
SCL59535.1
DivIVA domain-containing protein.
 
 
 
 0.768
SCL46031.1
N-acetylmuramoyl-L-alanine amidase; Manually curated.
    
 0.751
SCL61951.1
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.749
mltG
UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.737
SCL64937.1
Peptidase family M23.
  
     0.700
SCL48992.1
DivIVA domain-containing protein.
   
 
 0.698
SCL56281.1
Hypothetical protein.
   
 
 0.698
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.