STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL61857.1Predicted arabinose efflux permease, MFS family. (468 aa)    
Predicted Functional Partners:
SCL65529.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.812
SCL56060.1
Thioesterase domain-containing protein.
  
  
 0.724
SCL50285.1
Hypothetical protein.
  
     0.678
SCL46457.1
Hypothetical protein.
  
     0.668
SCL65252.1
Hypothetical protein.
  
     0.632
SCL63214.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.593
SCL52010.1
iron(III) transport system substrate-binding protein.
  
  
 0.578
SCL60436.1
iron(III) transport system substrate-binding protein.
  
  
 0.578
SCL55430.1
Acyl transferase domain-containing protein.
  
 
  0.571
SCL50995.1
Anti-sigma-K factor rskA.
  
  
 0.570
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.