Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCL61887.1Von Willebrand factor type A domain-containing protein. (561 aa)    
Predicted Functional Partners:
SCL50137.1
Magnesium chelatase subunit I.
  
 0.840
SCL57800.1
Ferredoxin-NADP reductase.
  
 
  0.670
SCL47139.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
  0.616
SCL61308.1
Hypothetical protein.
  
     0.465
SCL46457.1
Hypothetical protein.
  
     0.455
SCL61884.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
       0.440
SCL58968.1
Protein of unknown function.
  
     0.437
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.435
SCL61896.1
6-phosphogluconolactonase, cycloisomerase 2 family.
       0.433
SCL62261.1
Hypothetical protein.
  
     0.422
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.