STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL62012.1FHA domain-containing protein; Manually curated. (190 aa)    
Predicted Functional Partners:
SCL46194.1
Serine/threonine protein kinase.
 
 
 
 0.982
SCL46349.1
Serine/threonine protein kinase.
 
 
 
 0.981
SCL62402.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.981
SCL59691.1
Serine/threonine protein kinase.
 
 
 
 0.979
SCL46291.1
PASTA domain-containing protein.
   
 
 0.946
SCL61947.1
Glutamate dehydrogenase.
    
 
 0.946
SCL62365.1
Serine/threonine protein kinase.
  
 
 
 0.906
SCL57726.1
Serine/threonine protein kinase.
  
 
 
 0.904
SCL63773.1
Serine/threonine protein kinase.
  
 
 
 0.899
SCL58717.1
Serine/threonine protein kinase.
  
 
 
 0.897
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.