STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL62234.1Putative drug exporter of the RND superfamily. (724 aa)    
Predicted Functional Partners:
SCL62230.1
Transcriptional regulator, TetR family.
 
     0.715
SCL46194.1
Serine/threonine protein kinase.
   
 
 0.492
SCL46291.1
PASTA domain-containing protein.
   
 
 0.492
SCL46349.1
Serine/threonine protein kinase.
   
 
 0.492
SCL59691.1
Serine/threonine protein kinase.
   
 
 0.492
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.459
SCL56060.1
Thioesterase domain-containing protein.
   
 
 0.456
SCL59871.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
  
   
 0.450
SCL53621.1
Transcriptional regulator, TetR family.
 
   
 0.436
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.