STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL62482.1Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (570 aa)    
Predicted Functional Partners:
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
 0.999
SCL62916.1
Sulfate adenylyltransferase.
 
 
 0.987
SCL61591.1
uroporphyrinogen-III C-methyltransferase.
 
  
 0.986
SCL47139.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.980
SCL57800.1
Ferredoxin-NADP reductase.
   
 0.980
SCL62472.1
Sirohydrochlorin ferrochelatase.
 
  
 0.978
SCL62479.1
Hypothetical protein.
  
  
 0.971
SCL49279.1
Sulfate adenylyltransferase subunit 2.
 
 
 0.943
SCL55396.1
Sulfate adenylyltransferase subunit 2.
 
 
 0.943
SCL47049.1
Cysteine synthase A.
  
 
 0.916
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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