STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL63235.1Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (844 aa)    
Predicted Functional Partners:
SCL63239.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 0.999
SCL63229.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.993
SCL63214.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.977
SCL63233.1
Assimilatory nitrate reductase (NADH) beta subunit.
 
  
 
0.968
SCL63243.1
uroporphyrinogen-III synthase.
 
  
 0.961
SCL59041.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
 0.945
SCL60029.1
Glutamine synthetase.
    
 0.939
SCL51613.1
L-glutamine synthetase.
    
 0.900
SCL60101.1
Glutamine synthetase.
    
 0.900
SCL46787.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.873
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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