STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ30395.1ABC-2 type transport system permease protein. (606 aa)    
Predicted Functional Partners:
SDJ30367.1
ABC-2 type transport system ATP-binding protein.
 
    0.934
SDJ36649.1
ABC-2 type transport system ATP-binding protein.
 
    0.735
SDM28200.1
Hypothetical protein.
  
  0.735
SDM28222.1
HAMP domain-containing protein.
  
  0.735
SDL26871.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
 
    0.732
SDJ81112.1
Signal transduction histidine kinase.
   
 0.705
SDJ30426.1
PadR family transcriptional regulator, regulatory protein PadR.
       0.554
SDJ30457.1
Uncharacterized membrane-anchored protein.
       0.551
SDJ30334.1
Hypothetical protein.
       0.486
SDK24787.1
ABC-2 type transport system ATP-binding protein.
 
    0.477
Your Current Organism:
Nonomuraea maritima
NCBI taxonomy Id: 683260
Other names: CGMCC 4.5681, N. maritima, NBRC 106687, Nonomuraea maritima Xi et al. 2011, Nonomuraea sp. FXJ7.203, strain FXJ7.203
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.