STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ63054.1Predicted ATPase. (786 aa)    
Predicted Functional Partners:
SDJ81112.1
Signal transduction histidine kinase.
   
 0.996
SDM28200.1
Hypothetical protein.
   
 0.956
SDM28222.1
HAMP domain-containing protein.
   
 0.956
SDK95775.1
Tetratricopeptide repeat-containing protein.
  
 0.911
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.863
SDL30422.1
PAS domain S-box-containing protein.
   
 0.787
SDJ63028.1
AMP-binding enzyme.
 
     0.699
SDJ23545.1
DNA-binding transcriptional activator of the SARP family.
 
0.681
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
   0.671
SDK40573.1
Histidine kinase.
 
 0.670
Your Current Organism:
Nonomuraea maritima
NCBI taxonomy Id: 683260
Other names: CGMCC 4.5681, N. maritima, NBRC 106687, Nonomuraea maritima Xi et al. 2011, Nonomuraea sp. FXJ7.203, strain FXJ7.203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.