STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966285_00047Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_000966285_03509
Unannotated protein.
  
  
 0.742
GCA_000966285_03721
Unannotated protein.
  
 
  0.624
GCA_000966285_00046
Unannotated protein.
       0.620
GCA_000966285_01861
Unannotated protein.
  
  
 0.564
GCA_000966285_03508
Unannotated protein.
  
 
 0.553
GCA_000966285_05653
Unannotated protein.
  
  
 0.525
GCA_000966285_02894
Unannotated protein.
  
  
 0.518
GCA_000966285_03621
Unannotated protein.
     
 0.518
GCA_000966285_05006
Unannotated protein.
      
 0.483
GCA_000966285_01981
Unannotated protein.
  
    0.459
Your Current Organism:
Frankia sp. DC12
NCBI taxonomy Id: 683315
Other names: F. sp. DC12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.