STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966285_00643Unannotated protein. (188 aa)    
Predicted Functional Partners:
GCA_000966285_03715
Unannotated protein.
  
 
 0.736
GCA_000966285_03706
Unannotated protein.
  
 
 0.724
GCA_000966285_03751
Unannotated protein.
  
 
 0.724
GCA_000966285_01121
Unannotated protein.
  
     0.638
GCA_000966285_00242
Unannotated protein.
  
 
  0.578
GCA_000966285_01828
Unannotated protein.
    
 0.494
GCA_000966285_02787
Unannotated protein.
    
   0.489
GCA_000966285_00884
Unannotated protein.
     
 0.486
GCA_000966285_04962
Unannotated protein.
  
 0.460
GCA_000966285_05616
Unannotated protein.
  
 0.460
Your Current Organism:
Frankia sp. DC12
NCBI taxonomy Id: 683315
Other names: F. sp. DC12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.