STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAA29669.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
OAA29670.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain.
       0.854
OAA29668.1
SnoaL-like domain-containing protein; PFAM: SnoaL-like domain.
       0.529
OAA29666.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain.
       0.528
OAA29667.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
       0.469
Your Current Organism:
Frankia sp. EI5c
NCBI taxonomy Id: 683316
Other names: F. sp. EI5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.