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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAA27871.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
OAA19715.1
PFAM: PAS fold; TIGRFAM: PAS domain S-box.
  
 0.964
OAA27870.1
Hypothetical protein.
 
     0.918
OAA25320.1
Hypothetical protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phospho-acceptor) domain.
  
 0.875
OAA27120.1
Histidine kinase; FOG: HAMP domain; PFAM: HAMP domain.
  
 0.866
OAA25572.1
PFAM: Response regulator receiver domain.
   
 0.865
OAA20584.1
Hypothetical protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain.
   
 0.865
OAA29216.1
PFAM: Histidine kinase; PAS fold; TIGRFAM: PAS domain S-box.
   
 0.810
OAA28129.1
PFAM: Diguanylate cyclase, GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
  
 0.752
OAA25574.1
PAS/PAC sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; TIGRFAM: PAS domain S-box.
   
 0.689
OAA29593.1
GAF domain-containing protein; PFAM: Histidine kinase; GAF domain.
  
 0.664
Your Current Organism:
Frankia sp. EI5c
NCBI taxonomy Id: 683316
Other names: F. sp. EI5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.