STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaM-2Conserved hypothetical protein. (124 aa)    
Predicted Functional Partners:
dhaK-2
Dihydroxyacetone kinase subunit DhaK; Unnamed protein product.
 
 0.998
dhaL-2
Dihydroxyacetone kinase, Dak2 subunit, putative.
 
 0.998
dhaL
Dihydroxyacetone kinase (DAK) phosphatase domain protein.
 
 0.994
dhaK
Dihydroxyacetone kinase (DAK) kinase domain protein.
 
 0.990
dhaM
Dihydroxyacetone kinase (DAK) phosphotransferase subunit, putative.
  
  
 
0.919
lse_0294
Short-chain dehydrogenase/reductase (SDR) family protein.
   
 
  0.902
glpD
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.817
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
  0.800
lse_2599
Orn/Lys/Arg decarboxylase.
       0.467
lse_0247
Peptidase, M20/M25/M40 family.
   
    0.447
Your Current Organism:
Listeria seeligeri
NCBI taxonomy Id: 683837
Other names: L. seeligeri serovar 1/2b str. SLCC3954, Listeria seeligeri serovar 1/2b str. SLCC3954, Listeria seeligeri serovar 1/2b strain SLCC3954
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.