STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVLG_01573Rab-GAP TBC domain-containing protein. (1033 aa)    
Predicted Functional Partners:
MVLG_02858
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.745
MVLG_03815
Ras-like protein Rab-11B.
    
 0.699
MVLG_01867
Uncharacterized protein.
   
 
  0.688
MVLG_05033
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
     
 0.680
MVLG_04690
Uncharacterized protein.
   
 
  0.642
MVLG_00664
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 
  0.631
MVLG_06654
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 
  0.631
MVLG_05070
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
  0.626
MVLG_02414
NAK protein kinase.
   
 
  0.607
MVLG_05007
Phosphatase tensin-type domain-containing protein.
   
 
  0.601
Your Current Organism:
Microbotryum lychnidisdioicae
NCBI taxonomy Id: 683840
Other names: M. lychnidis-dioicae p1A1 Lamole, Microbotryum lychnidis-dioicae p1A1 Lamole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.