STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVLG_03431Pre-mRNA-splicing factor SYF1. (1031 aa)    
Predicted Functional Partners:
MVLG_06097
Pre-mRNA-splicing factor CLF1.
   
0.999
MVLG_03014
Pre-mRNA-splicing factor SLT11.
   
 0.998
MVLG_03842
Protein BUD31.
    
 0.998
MVLG_03973
RRM domain-containing protein.
   
 0.998
MVLG_03982
Uncharacterized protein.
   
 0.998
MVLG_07160
SKIP_SNW domain-containing protein.
   
 0.998
MVLG_07226
Uncharacterized protein.
    
 0.998
MVLG_03555
Pre-mRNA-splicing factor CEF1.
   
 
 0.994
MVLG_02892
U5 small nuclear ribonucleoprotein component.
   
 
 0.992
MVLG_03464
WD_REPEATS_REGION domain-containing protein.
    
 
 0.992
Your Current Organism:
Microbotryum lychnidisdioicae
NCBI taxonomy Id: 683840
Other names: M. lychnidis-dioicae p1A1 Lamole, Microbotryum lychnidis-dioicae p1A1 Lamole
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.