STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM65360.1Hypothetical protein. (261 aa)    
Predicted Functional Partners:
SFM65382.1
Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
  
 0.944
SFN01187.1
PAS domain S-box-containing protein.
    
  0.916
SFM65406.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.773
SFM65427.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
       0.773
SFM65451.1
Choline kinase.
       0.773
SFM65473.1
Predicted dehydrogenase.
       0.773
SFM74656.1
RNA polymerase-binding transcription factor DksA.
  
     0.748
SFM75868.1
LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA).
  
     0.738
SFN48536.1
Outer membrane protein insertion porin family.
  
     0.736
SFN06005.1
RNA polymerase Rpb6.
 
     0.735
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.