STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM75923.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (324 aa)    
Predicted Functional Partners:
SFN64244.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
SFN64204.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.996
SFM71707.1
Chemotaxis protein MotB.
 
 
   0.789
SFN22321.1
Hypothetical protein.
   
   0.760
SFM75898.1
N-acetylmuramoyl-L-alanine amidase.
 
     0.737
SFM75868.1
LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA).
 
   
 0.710
SFM75949.1
4Fe-4S dicluster domain-containing protein.
       0.697
SFM74404.1
Protein of unknown function.
  
     0.605
SFN33197.1
Autotransporter translocation and assembly factor TamB.
 
     0.578
SFN48536.1
Outer membrane protein insertion porin family.
 
     0.576
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.