STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM70543.1Putative peptide zinc metalloprotease protein. (387 aa)    
Predicted Functional Partners:
SFM91358.1
Regulatory protein, Fis family.
  
 0.828
SFM87167.1
Hypothetical protein.
  
 0.820
SFN08290.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
  
 0.820
SFN31141.1
Response regulator receiver domain-containing protein.
  
 0.820
SFM70566.1
Hypothetical protein.
       0.789
SFN01187.1
PAS domain S-box-containing protein.
  
  
 0.783
SFM70589.1
Hypothetical protein.
       0.773
SFM70613.1
Hypothetical protein.
       0.773
SFM70640.1
Hypothetical protein.
       0.773
SFM70669.1
Hypothetical protein.
       0.556
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.