STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM72313.1Cell division transport system ATP-binding protein. (230 aa)    
Predicted Functional Partners:
SFN14250.1
Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.990
SFN68805.1
Putative ABC transport system permease protein.
 
   
 0.919
SFN68836.1
Putative ABC transport system permease protein.
 
   
 0.919
SFN48088.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
  
 0.690
SFN07965.1
ABC-2 type transport system ATP-binding protein.
     0.674
rpsE
Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.629
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.607
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.558
SFM72340.1
Glycosyl transferases group 1.
       0.556
rpmH
Large subunit ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
       0.550
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.