STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM85443.1Peptidase family S41. (541 aa)    
Predicted Functional Partners:
SFM85467.1
Peptidase family S41.
 
    
0.810
SFM93935.1
Hypothetical protein.
  
   0.658
SFN02131.1
Por secretion system C-terminal sorting domain-containing protein.
  
   0.638
SFM85392.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.
   
   0.636
SFN20066.1
Hypothetical protein.
  
 
   0.602
SFM85421.1
Uncharacterized protein.
       0.598
SFM83989.1
ADP-heptose:LPS heptosyltransferase.
  
     0.569
SFM78090.1
Gliding motility-associated C-terminal domain-containing protein.
  
   0.509
SFN27822.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.504
SFN15090.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.498
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.