STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM92134.1Hypothetical protein. (422 aa)    
Predicted Functional Partners:
SFM92153.1
Long-chain fatty acid transport protein.
 
     0.929
SFN07086.1
Hypothetical protein.
  
     0.747
SFM92432.1
Protein of unknown function.
  
     0.724
SFN33197.1
Autotransporter translocation and assembly factor TamB.
  
     0.719
SFN32506.1
Hypothetical protein.
  
     0.714
SFN38388.1
Hypothetical protein.
  
     0.703
SFN01016.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.694
SFM92576.1
Hypothetical protein.
  
     0.658
SFN57177.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.658
SFM72213.1
Tetratricopeptide repeat-containing protein.
  
     0.655
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.