STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM93270.1Electron transfer flavoprotein beta subunit. (248 aa)    
Predicted Functional Partners:
SFM93247.1
Electron transfer flavoprotein alpha subunit.
 
 0.999
SFM77306.1
Acyl-CoA dehydrogenase.
 
 
 0.966
SFM98732.1
Acyl-CoA dehydrogenase.
 
 
 0.966
SFM89856.1
Hypothetical protein.
 
 
 0.965
SFN62680.1
glutaryl-CoA dehydrogenase.
 
 
 0.941
SFN55739.1
glutaryl-CoA dehydrogenase.
 
 
 0.913
SFN21866.1
Dehydrogenase (flavoprotein).
  
 
 0.896
SFN60109.1
Hypothetical protein.
  
 
 0.872
SFM89918.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.871
SFM65283.1
2,4-dienoyl-CoA reductase.
  
 
 0.849
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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