STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN13433.1Predicted nucleotidyltransferase. (352 aa)    
Predicted Functional Partners:
SFN13409.1
Hypothetical protein.
     0.981
SFN13386.1
SPFH domain / Band 7 family protein.
 
    0.843
SFN13454.1
tRNA-splicing ligase RtcB.
 
    0.843
SFN27198.1
Conserved hypothetical protein.
  
     0.480
SFN13364.1
WYL domain-containing protein.
  
     0.422
SFN71809.1
Hypothetical protein.
  
     0.407
SFM66392.1
5'-nucleotidase, lipoprotein e(P4) family.
  
     0.404
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.