STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN24661.1Outer membrane cobalamin receptor protein. (664 aa)    
Predicted Functional Partners:
SFN24690.1
Hypothetical protein.
 
     0.951
SFN24728.1
PKD-like domain-containing protein.
 
    0.948
SFN24779.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.872
SFN24750.1
Protein of unknown function.
       0.704
SFM98599.1
Hypothetical protein.
  
     0.580
SFM98619.1
Hypothetical protein.
  
     0.518
SFM90399.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.513
SFN60530.1
Hypothetical protein.
  
     0.506
SFM74343.1
Starch-binding associating with outer membrane.
  
 
   0.503
SFM63722.1
Hypothetical protein.
    
 
 0.500
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.