STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN37081.1ABC-2 type transport system ATP-binding protein. (383 aa)    
Predicted Functional Partners:
SFN37052.1
Hypothetical protein.
       0.789
SFN07939.1
ABC-2 type transport system permease protein.
  
 
 0.644
SFM93547.1
Hypothetical protein.
  
     0.616
SFN32322.1
Peptidase family M48.
  
     0.589
SFM86438.1
Outer membrane protein.
  
     0.524
SFM98619.1
Hypothetical protein.
  
     0.513
SFN38588.1
Protein of unknown function.
  
     0.485
rpsI
Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
     0.466
SFN67544.1
PAP2 superfamily protein.
  
     0.459
SFN19452.1
Cytochrome c-type biogenesis protein CcsB.
    
  0.452
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.