STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN43052.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
SFN43091.1
Hypothetical protein.
       0.799
SFN43014.1
Hypothetical protein.
       0.783
SFN42981.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.757
SFN20808.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
 
  
 0.621
SFM78824.1
Protein of unknown function.
  
     0.607
SFM73769.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
  
     0.585
SFM94205.1
Phage shock protein A.
 
  
 0.539
SFM63330.1
Methyltransferase domain-containing protein.
  
     0.531
SFM83458.1
PA domain-containing protein.
  
     0.524
SFN14500.1
Protein of unknown function.
  
     0.514
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.