STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN60166.1hydroxymethylglutaryl-CoA reductase/oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. (152 aa)    
Predicted Functional Partners:
SFN26614.1
hydroxymethylglutaryl-CoA reductase.
 
    
 0.894
SFM89918.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.825
SFM60594.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
  0.817
SFM58690.1
Catalase; Belongs to the catalase family.
   
 0.760
SFN36962.1
3-oxoacid CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
    
 0.720
SFN60204.1
Chromate reductase.
       0.655
SFM60947.1
2-oxoisovalerate dehydrogenase E1 component.
  
     0.649
SFM60865.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.646
SFM61365.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.646
SFN36871.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 
 0.646
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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