STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN62826.1AraC-type DNA-binding protein. (301 aa)    
Predicted Functional Partners:
SFN09758.1
AraC-type DNA-binding protein.
  
     0.712
SFM84178.1
AraC-type DNA-binding protein.
  
     0.684
SFM85646.1
AraC-type DNA-binding protein.
  
     0.616
SFN59670.1
AraC family transcriptional regulator, transcriptional activator of pobA.
  
     0.577
SFN62791.1
PhnB protein.
  
    0.557
SFN62865.1
Flavodoxin.
       0.536
SFN31939.1
AraC-type DNA-binding protein.
  
   0.531
SFN02157.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
  0.527
SFN14381.1
AraC-type DNA-binding protein.
  
   0.516
SFN33560.1
AraC-like ligand binding domain-containing protein.
  
   0.470
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.