STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN70034.1Hypothetical protein. (341 aa)    
Predicted Functional Partners:
SFM86274.1
Cell surface protein SprA.
  
   0.825
SFM64340.1
Peptidase family C25.
 
   
 0.791
SFM75371.1
Penicillin-binding protein 2.
   
 
 0.777
SFM91776.1
Cell division protein FtsI (penicillin-binding protein 3).
   
 
 0.777
SFM83027.1
Two component regulator propeller.
  
     0.775
SFM84015.1
Hypothetical protein.
  
     0.773
SFM71801.1
Outer membrane protein assembly factor BamA.
  
     0.771
SFN05573.1
Hypothetical protein.
  
     0.771
SFN19875.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.760
SFN68532.1
Hypothetical protein.
  
     0.746
Your Current Organism:
Algoriella xinjiangensis
NCBI taxonomy Id: 684065
Other names: A. xinjiangensis, Algoriella xinjiangensis Yang et al. 2016, CGMCC 1.10229, Flavobacteriaceae bacterium XJ109, JCM 16590, strain XJ109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.