STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A1Collagen type IV alpha 1 chain. (1669 aa)    
Predicted Functional Partners:
COL4A2
Collagen type IV alpha 2 chain.
  
0.999
COL4A6
Collagen type IV alpha 6 chain.
  
0.989
COL4A4
Collagen type IV alpha 4 chain.
  
 
0.941
ITGA3
Integrin subunit alpha 3.
     
 0.920
ITGA5
Integrin subunit alpha 5.
   
 0.909
COL6A2
Collagen type VI alpha 2 chain.
   
0.909
ENSMMSP00000017510
annotation not available
   
0.904
ITGA11
Integrin subunit alpha 11.
   
 
 0.901
ITGA1
Integrin subunit alpha 1.
     
 0.899
ITGA6
Integrin subunit alpha 6.
     
 0.898
Your Current Organism:
Moschus moschiferus
NCBI taxonomy Id: 68415
Other names: M. moschiferus, Siberian musk deer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.