STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTF1APancreas associated transcription factor 1a. (326 aa)    
Predicted Functional Partners:
FOXN4
Forkhead box N4.
   
  
 0.913
ISL1
ISL LIM homeobox 1.
   
 0.824
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.815
TCF12
Transcription factor 12.
   
 0.813
TCF4
Transcription factor 4.
   
 0.794
TCF3
Transcription factor 3.
   
 0.794
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
   
 0.792
ISL2
ISL LIM homeobox 2.
   
 0.781
CPA1
Carboxypeptidase A1.
   
  
 0.777
BARHL2
BarH like homeobox 2.
   
  
 0.776
Your Current Organism:
Moschus moschiferus
NCBI taxonomy Id: 68415
Other names: M. moschiferus, Siberian musk deer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.