STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RO60Ro60, Y RNA binding protein. (538 aa)    
Predicted Functional Partners:
TRIM21
Tripartite motif containing 21.
    
 0.933
ENSMMSP00000021645
annotation not available
    
 
 0.772
ENSMMSP00000032383
annotation not available
    
 
 0.772
HARS2
histidyl-tRNA synthetase 2, mitochondrial.
      
 0.752
HARS1
histidyl-tRNA synthetase 1.
      
 0.727
TRIM58
Tripartite motif containing 58.
    
 0.715
CENPB
Centromere protein B.
      
 0.696
SSH3
Slingshot protein phosphatase 3.
      
 0.601
AGO2
Argonaute RISC catalytic component 2.
    
 
 0.599
MOG
Myelin oligodendrocyte glycoprotein.
    
 0.573
Your Current Organism:
Moschus moschiferus
NCBI taxonomy Id: 68415
Other names: M. moschiferus, Siberian musk deer
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