STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWT1SWT1 RNA endoribonuclease homolog. (903 aa)    
Predicted Functional Partners:
TRMT1L
tRNA methyltransferase 1 like.
   
  
 0.914
RNF2
Ring finger protein 2.
      
 0.747
TRIML2
Tripartite motif family like 2.
      
 0.745
ENSMMSP00000007198
annotation not available
      
 0.736
ENSMMSP00000018913
annotation not available
      
 0.736
AGTRAP
Angiotensin II receptor associated protein.
      
 0.735
GTF2H5
General transcription factor IIH subunit 5.
      
 0.705
ZNFX1
Zinc finger NFX1-type containing 1.
      
 0.699
ENSMMSP00000005053
annotation not available
      
 0.670
ENSMMSP00000021663
annotation not available
      
 0.670
Your Current Organism:
Moschus moschiferus
NCBI taxonomy Id: 68415
Other names: M. moschiferus, Siberian musk deer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.