STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP43Ubiquitin specific peptidase 43. (1126 aa)    
Predicted Functional Partners:
USP39
Ubiquitin specific peptidase 39.
      
 0.769
USP10
Ubiquitin specific peptidase 10.
    
0.738
ISG15
ISG15 ubiquitin like modifier.
    
 0.723
MRPS9
Mitochondrial ribosomal protein S9.
   
 
 0.719
KRT73
Keratin 73.
      
 0.719
SPINK8
Serine peptidase inhibitor, Kazal type 8 (putative).
      
 0.719
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.717
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.716
MRPL11
Mitochondrial ribosomal protein L11.
    
 
 0.714
USP14
Ubiquitin specific peptidase 14.
    
 
 0.712
Your Current Organism:
Moschus moschiferus
NCBI taxonomy Id: 68415
Other names: M. moschiferus, Siberian musk deer
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