STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COP1COP1 E3 ubiquitin ligase. (735 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.994
ENSMMSP00000016362
annotation not available
    
 0.993
TP53
Tumor protein p53.
    
 0.991
CUL4A
Cullin 4A.
    
 0.979
CUL4B
Cullin 4B.
    
 0.976
RBX1
Ring-box 1.
    
 0.972
DDB2
Damage specific DNA binding protein 2.
    
 0.961
ENSMMSP00000021561
annotation not available
    
 0.960
ENSMMSP00000025621
annotation not available
    
 0.959
TRIB1
Tribbles pseudokinase 1.
    
 
 0.948
Your Current Organism:
Moschus moschiferus
NCBI taxonomy Id: 68415
Other names: M. moschiferus, Siberian musk deer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.