STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F4PB36_BATDJMethionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (354 aa)    
Predicted Functional Partners:
F4P1N6_BATDJ
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.989
F4P3P8_BATDJ
Uncharacterized protein.
  
 
 0.962
F4NUR8_BATDJ
Ribosomal_L18_c domain-containing protein.
  
 
 0.960
F4P643_BATDJ
Uncharacterized protein.
  
 
 0.959
F4PAX6_BATDJ
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.951
F4P163_BATDJ
Ribosomal_L23eN domain-containing protein.
  
 
 0.939
F4PAP3_BATDJ
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.931
F4P3B9_BATDJ
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
   0.880
F4NSA7_BATDJ
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.853
F4P905_BATDJ
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.853
Your Current Organism:
Batrachochytrium dendrobatidis JAM81
NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.