STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR65377.1Peptide/nickel transport system substrate-binding protein. (551 aa)    
Predicted Functional Partners:
SDR65362.1
Peptide/nickel transport system permease protein.
 0.995
SDR65371.1
Peptide/nickel transport system permease protein.
 0.986
SDR65328.1
Alkylhydroperoxidase domain protein, Avi_7169 family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
    0.964
SDR65335.1
CMD domain protein, Avi_7170 family.
 
    0.947
SDR65343.1
Putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family.
 
     0.944
SDR65354.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.941
SDR65323.1
Glyoxalase-like domain-containing protein.
 
     0.926
SDR87321.1
Peptide/nickel transport system permease protein.
 0.814
SDR74878.1
Peptide/nickel transport system permease protein.
 
 0.794
SDR87277.1
Peptide/nickel transport system permease protein.
 0.768
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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