STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR67553.1Protein of unknown function. (203 aa)    
Predicted Functional Partners:
SDR67546.1
Protein of unknown function.
 
     0.845
dut
dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.831
SDR67579.1
Protein of unknown function.
 
     0.801
SDR67803.1
Protein of unknown function.
  
     0.735
SDR67165.1
Protein of unknown function.
  
     0.716
SDS51968.1
MerR HTH family regulatory protein.
  
     0.663
SDR67573.1
Protein of unknown function.
       0.654
SDS53627.1
Protein of unknown function.
  
     0.652
SDR67537.1
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
       0.633
SDR73816.1
Putative hydrolase.
  
   
 0.620
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.