STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR80827.1Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (567 aa)    
Predicted Functional Partners:
SDS12293.1
L-proline dehydrogenase.
  
  
 0.895
SDS30000.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.895
SDR80795.1
Hypothetical protein.
       0.796
SDS38692.1
Carbon starvation protein.
  
    0.652
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.628
SDR80767.1
Amino acid/polyamine/organocation transporter, APC superfamily.
  
  
 0.611
SDR80729.1
Mechanosensitive ion channel.
     
 0.497
SDR93767.1
Integral membrane protein.
  
    0.481
SDR85524.1
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
  
  
 0.433
SDR83740.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.