STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR87321.1Peptide/nickel transport system permease protein. (334 aa)    
Predicted Functional Partners:
SDR87277.1
Peptide/nickel transport system permease protein.
 
 0.997
SDR87364.1
Peptide/nickel transport system substrate-binding protein.
 0.996
SDR65362.1
Peptide/nickel transport system permease protein.
 
 0.986
SDR74854.1
Peptide/nickel transport system permease protein.
 
 0.983
SDR65354.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.925
SDR74798.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.904
SDR87234.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.901
SDR65377.1
Peptide/nickel transport system substrate-binding protein.
 0.814
SDR74896.1
Peptide/nickel transport system substrate-binding protein.
  
 0.725
SDR74946.1
Peptide/nickel transport system substrate-binding protein.
  
 0.725
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.