STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR95137.1Hypothetical protein. (908 aa)    
Predicted Functional Partners:
SDS37233.1
Hypothetical protein.
    
   0.755
SDR86163.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
   
  0.684
SDS41951.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
    
  0.669
SDS21871.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.
    
 0.665
SDR95093.1
LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein.
    
  0.642
SDS48457.1
SseB protein N-terminal domain-containing protein.
   
  0.619
SDS01867.1
Hypothetical protein.
    
 
 0.608
SDS44908.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.593
SDS23674.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.585
SDS47630.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.583
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.