STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS06512.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (453 aa)    
Predicted Functional Partners:
SDS06429.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.999
SDS06459.1
ABC-type sugar transport system, permease component.
 
  0.996
SDR65220.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.965
SDS32097.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.965
SDR65210.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.938
SDS30522.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.938
SDR65202.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Manually curated.
  
 0.935
SDS30474.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Manually curated.
  
  0.771
SDR88491.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.748
SDR65214.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
     
 0.581
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.