STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS35675.1Teichoic acid transport system permease protein. (320 aa)    
Predicted Functional Partners:
SDS35624.1
Teichoic acid transport system ATP-binding protein.
 
 0.998
SDR81709.1
ABC-2 type transport system ATP-binding protein.
 
 0.994
SDS35574.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.911
SDS35711.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.802
SDS35114.1
Spore maturation protein CgeB.
 
    0.712
SDS35389.1
Glycosyl transferases group 1; Manually curated.
 
     0.615
SDR81672.1
ABC-2 type transport system permease protein.
  
  
 
0.547
SDR84332.1
Lipooligosaccharide transport system permease protein.
    
  0.497
SDR84408.1
Lipooligosaccharide transport system permease protein.
    
  0.497
SDR87880.1
ABC-2 type transport system permease protein.
    
  0.497
Your Current Organism:
Agrococcus carbonis
NCBI taxonomy Id: 684552
Other names: A. carbonis, Agrococcus carbonis Dhanjal et al. 2011, Agrococcus sp. G4, DSM 22965, MTCC 10213, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.